Accession SAMC048135
Sample name Dale_Ec_Col 32
Title Dale_Ec_Col 32
Sample type Clinical or host-associated pathogen
Organism Escherichia coli
Description Genetic sequencing for surveillance of virulence factor profiling and strain typing of Escherichia coli
Attributes
Isolate
Strain
Collected by Dr Adam Dale
Collection date 2017-04-01
Geographic location Southampton, England
Host Homo sapiens
Host disease Urinary Tract Infecton
Isolation source Human Urine, Blood or Tissue
Latitude and longitude 50.93 N 1.43 W
Culture collection
genotype
Host age
Host description
Host disease stage
Host health state
Host sex
Host subject id
Host tissue sampled
Passage history
Pathotype
Serotype
Serovar
Specimen voucher
Subgroup
Subtype
Release Date 2018-11-19
Accession PRJCA001033
Submitter Anish Kumar Pandey  (anishkumarpandey89@gmail.com)
Organization University of Southampton
Submission Date 2018-11-19

Sample Data

Resource Name Description
GSA (1) -
CRA001237 Whole-Genome Sequencing of Escherichia coli
-