Accession PRJCA004050
Title Surveillance and whole genome sequencing of Human Norovirus and other Foodborne viruses from inbound passengers monitored by Shanghai Customs China during 2018
Relevance Medical
Data types Whole genome sequencing
Genome sequencing and assembly
Raw sequence reads
Organisms Norovirus
Description Epidemiological investigation was conducted by Shanghai Customs in 2018 according to the passengers self-reported gastrointestinal symptoms. Laboratory-confirmed norovirus-positive samples were further sequenced by NGS aiming at whole viral genome obtaining, laid the foundation for norovirus genotyping, tracking and tracing analyses. Sequences obtained in this study recorded the pattern of norovirus cross-broad transmission, provided more genome information for norovirus database.
Sample scope clinical samples
Release date 2021-01-01
Data provider
Data provider Data provider URL
Zilong Zhang http://shanghai.customs.gov.cn/
Chinese National Human Genome Center at Shanghai http://www.chgc.sh.cn/
Biomaterial provider Shanghai International Travel Healthcare Center, Shanghai Customs District P. R. China
Grants
Agency program Grant ID Grant title
National Science and Technology Major Project 2018ZX10101003-002
Submitter Danlei    Liu  (liudanlei@sjtu.edu.cn)
Organization shanghai jiaotong university
Submission date 2020-12-16

Project Data

Resource name Description
BioSample (83)  show -
GSA (1) -
CRA003648 Surveillance and whole genome sequencing of Human Norovirus and other Foodborne viruses from inbound passengers monitored by Shanghai Customs China during 2018