Accession

PRJCA003422

Title

Comparative Viromes of Culicoides and Mosquitoes Reveal Their Consistency and Diversity in Viral Profiles

Relevance

Evolution

Data types

Metagenome

Organisms

metagenomes

Description

The genus Culicoides includes biting midges, some of which are vectors for viruses that cause diseases in humans and animals. Knowledge of the roles of Culicoides in viral ecology is inadequate. We collected ~300,000 samples of Culicoides and mosquitoes in 15 representative regions within Yunnan, China. Using mosquitoes as reference vectors, we designed a comparative virome strategy to study the viral composition, diversity, hosts, and spatiotemporal distribution of Culicoides. A map of viromes in Culicoides and mosquitoes in Yunan province, China, was constructed.

Sample scope

Multispecies

Release date

2020-11-11

Grants

Agency	program	Grant ID	Grant title
Ministry of Science and Technology of the People's Republic of China (MOST)	National Key Technologies R&D Program	2016YFD0500300

Submitter

Lin Liu (liulin2016bj@163.com)

Organization

Center of Systems Medicine, Chinese Academy of Medical Sciences, Suzhou Institute of Systems Medicine

Submission date

2020-09-09

Project Data

Resource name	Description
BioSample (123) show	-
SAMC272062	Culicoides sample No.123
SAMC272061	Culicoides sample No.122
SAMC272060	Culicoides sample No.121
SAMC272059	Culicoides sample No.120
SAMC272058	Culicoides sample No.119
SAMC272057	Mosquitoes sample No.118
SAMC272056	Culicoides sample No.117
SAMC272055	Culicoides sample No.116
SAMC272054	Culicoides sample No.115
SAMC272053	Culicoides sample No.114
SAMC272052	Culicoides sample No.113
SAMC272051	Mosquitoes sample No.112
SAMC272050	Culicoides sample No.111
SAMC272049	Culicoides sample No.110
SAMC272048	Culicoides sample No.109
SAMC272047	Culicoides sample No.108
SAMC272046	Culicoides sample No.107
SAMC272045	Mosquitoes sample No.106
SAMC272044	Mosquitoes sample No.105
SAMC272043	Culicoides sample No.104
SAMC272042	Culicoides sample No.103
SAMC272041	Culicoides sample No.102
SAMC272040	Culicoides sample No.101
SAMC272039	Culicoides sample No.100
SAMC272038	Mosquitoes sample No.99
SAMC272037	Culicoides sample No.98
SAMC272036	Culicoides sample No.97
SAMC272035	Culicoides sample No.96
SAMC272034	Culicoides sample No.95
SAMC272033	Culicoides sample No.94
SAMC272032	Culicoides sample No.93
SAMC272031	Mosquitoes sample No.92
SAMC272030	Mosquitoes sample No.91
SAMC272029	Mosquitoes sample No.90
SAMC272028	Mosquitoes sample No.89
SAMC272027	Mosquitoes sample No.88
SAMC272026	Mosquitoes sample No.87
SAMC272025	Mosquitoes sample No.86
SAMC272024	Mosquitoes sample No.85
SAMC272023	Mosquitoes sample No.84
SAMC272022	Mosquitoes sample No.83
SAMC272021	Mosquitoes sample No.82
SAMC272020	Mosquitoes sample No.81
SAMC272019	Mosquitoes sample No.80
SAMC272018	Mosquitoes sample No.79
SAMC272017	Mosquitoes sample No.78
SAMC272016	Mosquitoes sample No.77
SAMC272015	Mosquitoes sample No.76
SAMC272014	Mosquitoes sample No.75
SAMC272013	Mosquitoes sample No.74
SAMC272012	Mosquitoes sample No.73
SAMC272011	Mosquitoes sample No.72
SAMC272010	Mosquitoes sample No.71
SAMC272009	Mosquitoes sample No.70
SAMC272008	Mosquitoes sample No.69
SAMC272007	Culicoides sample No.68
SAMC272006	Culicoides sample No.67
SAMC272005	Culicoides sample No.66
SAMC272004	Culicoides sample No.65
SAMC272003	Culicoides sample No.64
SAMC272002	Mosquitoes sample No.63
SAMC272001	Mosquitoes sample No.62
SAMC272000	Mosquitoes sample No.61
SAMC271999	Mosquitoes sample No.60
SAMC271998	Mosquitoes sample No.59
SAMC271997	Culicoides sample No.58
SAMC271996	Culicoides sample No.57
SAMC271995	Mosquitoes sample No.56
SAMC271994	Mosquitoes sample No.55
SAMC271993	Mosquitoes sample No.54
SAMC271992	Mosquitoes sample No.53
SAMC271991	Mosquitoes sample No.52
SAMC271990	Culicoides sample No.51
SAMC271989	Culicoides sample No.50
SAMC271988	Culicoides sample No.49
SAMC271987	Culicoides sample No.48
SAMC271986	Culicoides sample No.47
SAMC271985	Mosquitoes sample No.46
SAMC271984	Culicoides sample No.45
SAMC271983	Culicoides sample No.44
SAMC271982	Culicoides sample No.43
SAMC271981	Culicoides sample No.42
SAMC271980	Culicoides sample No.41
SAMC271979	Mosquitoes sample No.40
SAMC271978	Mosquitoes sample No.39
SAMC271977	Mosquitoes sample No.38
SAMC271976	Mosquitoes sample No.37
SAMC271975	Culicoides sample No.36
SAMC271974	Culicoides sample No.35
SAMC271973	Culicoides sample No.34
SAMC271972	Culicoides sample No.33
SAMC271971	Culicoides sample No.32
SAMC271970	Culicoides sample No.31
SAMC271969	Culicoides sample No.30
SAMC271968	Mosquitoes sample No.29
SAMC271967	Mosquitoes sample No.28
SAMC271966	Mosquitoes sample No.27
SAMC271965	Mosquitoes sample No.26
SAMC271964	Mosquitoes sample No.25
SAMC271963	Culicoides sample No.24
SAMC271962	Culicoides sample No.23
SAMC271961	Mosquitoes sample No.22
SAMC271960	Mosquitoes sample No.21
SAMC271959	Mosquitoes sample No.20
SAMC271958	Mosquitoes sample No.19
SAMC271957	Mosquitoes sample No.18
SAMC271956	Mosquitoes sample No.17
SAMC271955	Mosquitoes sample No.16
SAMC271954	Culicoides sample No.15
SAMC271953	Culicoides sample No.14
SAMC271952	Culicoides sample No.13
SAMC271951	Culicoides sample No.12
SAMC271950	Culicoides sample No.11
SAMC271949	Mosquitoes sample No.10
SAMC271948	Mosquitoes sample No.9
SAMC271947	Mosquitoes sample No.8
SAMC271946	Mosquitoes sample No.7
SAMC271945	Mosquitoes sample No.6
SAMC271944	Culicoides sample No.5
SAMC271943	Culicoides sample No.4
SAMC271942	Culicoides sample No.3
SAMC271941	Culicoides sample No.2
SAMC271940	Culicoides sample No.1
GSA (1)	-
CRA003508	Comparative Viromes of Culicoides and Mosquitoes