| Accession |
PRJCA002951 |
| Title |
Epigenetic and three-dimensional genomic analysis of long non-coding and circular RNAs in Xian/Indica rice |
| Relevance |
Agricultural |
| Data types |
Transcriptome or Gene expression
Raw sequence reads
|
| Organisms |
Oryza sativa
|
| Description |
To uncover the comprehensive role that ncRNAs played in plants, we performed high-throughput sequencing analysis to identify and characterize lncRNAs and circRNAs from three different tissues in the above three rice varieties, then we characterized their genomic regions of origin, analyzed the influence of methylation, TEs and the chromatin 3D structure in their formation and between them, and uncovered their functions and interactions with miRNAs as ceRNAs in the regulation of gene expression. |
| Sample scope |
Multispecies |
| Release date |
2020-07-01 |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Natural Science Foundation of China (NSFC)
|
|
31871269
|
|
| Hubei Provincial Natural Science Foundation of China
|
|
2019CFA014
|
|
| National Natural Science Foundation of China (NSFC)
|
|
31571351
|
|
|
|
| Submitter |
Zhou
Run (774811256@qq.com)
|
| Organization |
Huazhong Agricultural University |
| Submission date |
2020-07-01 |
