| Accession |
PRJCA002844 |
| Title |
Characterization of accessible chromatin regions reveals their functional roles for gene transcription and epigenetic modifications in Sorghum bicolor genome |
| Relevance |
Agricultural |
| Data types |
Epigenomics
Transcriptome or Gene expression
Raw sequence reads
|
| Organisms |
Sorghum bicolor
|
| Description |
Accessible chromatin region (ACR) is one of the major chromatin regulators of plant gene transcriptional expression. Here, using transposase-accessible chromatin sequencing (ATAC-seq), we revealed the profiling of ACRs in sorghum genome, thereby establishing ACR associated crosstalk networks that involve multiple epigenetic marks and regulatory gene expression. |
| Sample scope |
Monoisolate |
| Release date |
2020-06-30 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 33511349
|
Accessible chromatin regions and their functional interrelations with gene transcription and epigenetic modifications in sorghum genome
|
Plant Communications
|
10.1016/j.xplc.2020.100140
|
2021
|
|
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Natural Science Foundation of China (NSFC)
|
|
31900427
|
|
| National Natural Science Foundation of China (NSFC)
|
|
31600981
|
|
| The Project of Youth Talent in Hubei Provincial Department of Education
|
|
Q20191207
|
|
|
|
| Submitter |
Chao
Zhou (zhouchao@ctgu.edu.cn)
|
| Organization |
China Three Gorges University |
| Submission date |
2020-06-13 |
