| Accession |
PRJCA002377 |
| Title |
RNA-seq of tomato plants responding to F. oxysporum. |
| Relevance |
Agricultural |
| Data types |
Transcriptome or Gene expression
Raw sequence reads
|
| Organisms |
Solanum lycopersicum
|
| Description |
Two-week-old MM and SlymiR482e-3p-knock-out (SlymiR482e-3p-KO) seedlings were infected with either mock (water) or Fol for 24 hours. Roots were collected from three biological replicates (20 seedlings each). Total RNA was extracted using TRIzol Reagent (15596026, Life Technologies, CA, USA), and mRNA was purified with magnetic beads with Oligo (dT). For each library, 2 μg total mRNA was applied to generate the Illumina library according to the manufacturer instruction. The libraries were subsequently sequenced using Illumina HiSeqTM 2000 (Biomarker Technologies). |
| Sample scope |
Multiisolate |
| Release date |
2020-03-13 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 32621307
|
SlymiR482e-3p mediates tomato wilt disease by modulating ethylene response pathway
|
Plant Biotechnology Journal
|
10.1111/pbi.13439
|
2021
|
|
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Natural Science Foundation of China (NSFC)
|
|
31972351
|
|
|
|
| Submitter |
Shou-Qiang
Ouyang (oysq@yzu.edu.cn)
|
| Organization |
Yangzhou University |
| Submission date |
2020-03-13 |
