Accession PRJCA002236
Title Pipelines of microbiome data
Relevance Agricultural
Data types Metagenome
Metagenomic assembly
Organisms Microbiota
human gut metagenome
Description Sample data for pipeline testing
Sample scope Environment
Release date 2020-02-19
Publication
PubMed ID Article title Journal name DOI Year
33442053 High-throughput cultivation and identification of bacteria from the plant root microbiota Nature Protocols 10.1038/s41596-020-00444-7 2021
EasyAmplicon: An easy-to-use, open-source, reproducible, and community-based pipeline for amplicon data analysis in microbiome research iMeta 10.1002/imt2.83 2023
Grants
Agency program Grant ID Grant title
No funding support
Submitter Yong-Xin    Liu  (woodcorpse@163.com)
Organization Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
Submission date 2020-02-11

Project Data

Resource name Description
BioSample (34)  show -
GSA (3) -
CRA002517 A simple culturome project for pipeline test
CRA002355 A simple metagenome project for pipeline test
CRA002352 A simple 16S amplicon project for pipeline test