Accession PRJCA002202
Title 2019 novel coronavirus (nCov)
Relevance Medical
Data types Transcriptome or Gene expression
Organisms Severe acute respiratory syndrome coronavirus 2
Bacteria
Description 2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3, to detect variants.
Sample scope Bronchoalveolar lavage fluid
Release date 2020-03-26
Publication
PubMed ID Article title Journal name DOI Year
32129843 Genomic diversity of SARS-CoV-2 in Coronavirus Disease 2019 patients Clinical Infectious Diseases 10.1093/cid/ciaa203 2020
Grants
Agency program Grant ID Grant title
No funding support
Submitter Lili    Ren  (renliliipb@163.com)
Organization Institute of pathogen Biology
Submission date 2020-02-10

Project Data

Resource name Description
BioSample (57) -
SAMC149809 Negative control
SAMC149808 Negative control
SAMC149807 Negative control
SAMC149806 Negative control
SAMC149805 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149804 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149803 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149802 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149801 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149800 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149799 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149798 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149797 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149796 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149795 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149794 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149793 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149792 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149791 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149790 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149789 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149788 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149787 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149786 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149785 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149784 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149783 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149782 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149781 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149780 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149779 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149778 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149777 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149776 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149775 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149774 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149773 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149772 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149771 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149770 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149769 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149768 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149767 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149766 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149765 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149764 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149763 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149762 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149761 RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC134556 nCov8
SAMC134555 nCov7
SAMC134554 nCov6
SAMC134553 nCov5
SAMC134552 nCov4
SAMC134551 nCov3
SAMC134550 nCov2
SAMC134549 nCov1
GSA (3) -
CRA002476 RNA-seq of community-acquired pneumonia in BALF
CRA002475 2019 novel coronavirus(nCoV)
CRA002334 2019 novel coronavirus(nCoV)