Accession PRJCA001903
Title Chromosome-level genome assembly for giant panda
Relevance Evolution
Data Types Whole genome sequencing
Organisms Ailuropoda melanoleuca
Description By integrating the strategies of flow sorting, 10X Genomics Chromium sequencing and reference-assisted assembly, we present a chromosome-level giant panda draft genome with a total size of 2.29 Gb.
Sample scope Monoisolate
Release date 2019-12-01
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 31821001
Chinese Academy of Sciences (CAS) XDB31000000
Chinese Academy of Sciences (CAS) QYZDYSSWSMC019
Ministry of Science and Technology of China 2016YFC0503200
Monitoring and Assessment Project of Ministry of Ecology and Environment of China 2019HB2096001006
Youth Innovation Promotion Association of the Chinese Academy of Sciences 2016082
Submitter Huizhong    Fan  (fanhuizhong@ioz.ac.cn)
Organization Institute of Zoology, Chinese Academy of Sciences
Submission date 2019-11-08

Project Data

Resource name Description
BioSample (2) -
SAMC113654 Giant panda sample used for chromosome sequencing
SAMC113653 10X Genomics sequencing of giant panda
GSA (2) -
CRA002090 Flow-sorted chromosome sequencing data used for chromosome-level giant panda genome assembly
CRA002089 10X Genomics sequencing data of giant panda