Accession PRJCA001857
Title Simplified Poly(A) Anchored Sequencing (SiPAS)
Relevance Agricultural
Data types Transcriptome or Gene expression
Organisms Triticum aestivum
Description These are data supporting the manuscript “Boosting the power of plant transcriptomics by developing an efficient gene expression profiling approach”. We provide a powerful 3’RNA-seq method (SiPAS) to enable large-scale applications of population transcriptomics for genetic research and breeding in plants. By using this method, high-throughput gene expression profiling can be achieved.
Sample scope Multiplexing
Release date 2019-10-22
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 31970631 小麦简化测序遗传变异数据库与基因型检索分型技术研究
Submitter Jun    Xu  (junxu1048@genetics.ac.cn)
Organization Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
Submission date 2019-10-22

Project Data

Resource name Description
BioSample (8) -
SAMC112207 Library construction of SiPAS and PLATE-seq in both am and pm conditions with two replicates of each method.
SAMC112206 Library construction of SiPAS in 96-well plate in both am and pm conditions.
SAMC112205 Library construction of TruSeq in pm condition (replicate 3).
SAMC112204 Library construction of TruSeq in pm condition (replicate 2).
SAMC112203 Library construction of TruSeq in pm condition (replicate 1).
SAMC112202 Library construction of TruSeq in am condition (replicate 3).
SAMC112201 Library construction of TruSeq in am condition (replicate 2).
SAMC112200 Library construction of TruSeq in am condition (replicate 1).
GSA (1) -
CRA002059 Quantitate gene expression of plant population.