Accession PRJCA001763
Title Haplotype-resolved genome analyses of a heterozygous diploid potato
Relevance Agricultural
Data Types Whole genome sequencing
Genome sequencing and assembly
Raw sequence reads
Genome sequencing
Assembly
Organisms Solanum tuberosum
Description Haplotype-resolved genome analyses of a heterozygous diploid potato
Sample scope Monoisolate
Release date 2019-09-24
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 31601360
Submitter Die    Tang  (tangdie_solab@163.com)
Organization Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
Submission date 2019-08-26

Project Data

Resource name Description
BioSample (43) -
SAMC109787 Bisulfite-Seq of potato tissue: mature leaf, the third replicate.
SAMC109786 Bisulfite-Seq of potato tissue: mature leaf, the second replicate.
SAMC109785 Bisulfite-Seq of potato tissue: mature leaf, the first replicate.
SAMC109784 Bisulfite-Seq of potato tissue: immature big tuber (1 cm <transection diameter < 5 cm), the third replicate.
SAMC109783 Bisulfite-Seq of potato tissue: immature big tuber (1 cm <transection diameter < 5 cm), the second replicate.
SAMC109782 Bisulfite-Seq of potato tissue: immature big tuber (1 cm <transection diameter < 5 cm), the first replicate.
SAMC109781 Bisulfite-Seq of potato tissue: immature small tuber (transection diameter < 1 cm), the third replicate.
SAMC109780 Bisulfite-Seq of potato tissue: immature small tuber (transection diameter < 1 cm), the second replicate.
SAMC109779 Bisulfite-Seq of potato tissue: immature small tuber (transection diameter < 1 cm), the first replicate.
SAMC109778 RNA-seq of potato tissue: immature big tuber (1 cm <transection diameter < 5 cm), the third replicate.
SAMC109777 RNA-seq of potato tissue: immature big tuber (1 cm <transection diameter < 5 cm), the second replicate.
SAMC109776 RNA-seq of potato tissue: immature big tuber (1 cm <transection diameter < 5 cm), the first replicate.
SAMC109775 RNA-seq of potato tissue: immature small tuber (transection diameter < 1 cm), the third replicate.
SAMC109774 RNA-seq of potato tissue: immature small tuber (transection diameter < 1 cm), the second replicate.
SAMC109773 RNA-seq of potato tissue: immature small tuber (transection diameter < 1 cm), the first replicate.
SAMC109772 RNA-seq of potato tissue: stolon, the third replicate.
SAMC109771 RNA-seq of potato tissue: stolon, the second replicate.
SAMC109770 RNA-seq of potato tissue: stolon, the first replicate.
SAMC109769 RNA-seq of potato tissue: root, the third replicate.
SAMC109768 RNA-seq of potato tissue: root, the second replicate.
SAMC109767 RNA-seq of potato tissue: root, the first replicate.
SAMC109766 RNA-seq of potato tissue: stem, the third replicate.
SAMC109765 RNA-seq of potato tissue: stem, the second replicate.
SAMC109764 RNA-seq of potato tissue: stem, the first replicate.
SAMC109763 RNA-seq of potato tissue: carpel, the third replicate.
SAMC109762 RNA-seq of potato tissue: carpel, the second replicate.
SAMC109761 RNA-seq of potato tissue: carpel, the first replicate.
SAMC109760 RNA-seq of potato tissue: anther, the third replicate.
SAMC109759 RNA-seq of potato tissue: anther, the second replicate.
SAMC109758 RNA-seq of potato tissue: anther, the first replicate.
SAMC109757 RNA-seq of potato tissue: perianth, the third replicate.
SAMC109756 RNA-seq of potato tissue: perianth, the second replicate.
SAMC109755 RNA-seq of potato tissue: perianth, the first replicate.
SAMC109754 RNA-seq of potato tissue: mature leaf, the third replicate.
SAMC109753 RNA-seq of potato tissue: mature leaf, the second replicate.
SAMC109752 RNA-seq of potato tissue: mature leaf, the first replicate.
SAMC109751 RNA-seq of potato tissue: young leaf, the third replicate.
SAMC109750 RNA-seq of potato tissue: young leaf, the second replicate.
SAMC109749 RNA-seq of potato tissue: young leaf, the first replicate.
SAMC109748 Sequencing of HiC library of potato: RH89-039-16
SAMC109747 Nanopore sequencing of potato: RH89-039-16
SAMC109746 Sequencing of 10X Genomics library of potato: RH89-039-16
SAMC109745 Whole genome sequencing of potato: RH89-039-16
GSA (1) -
CRA002005 Haplotype-resolved genome analyses of a heterozygous diploid potato