| Accession |
PRJCA001645 |
| Title |
Systematic evaluation of the application of 3rd-generation sequencing in human fecal metagenomics |
| Relevance |
Environmental |
| Data types |
Metagenome
|
| Organisms |
human gut metagenome
|
| Description |
We present an extensive evaluation of NGS and TGS technologies on human metagenome. We adopted four strategies (CCS-only, co-assembly, hybrid-assembly and NGS-assembly) to assemble human fecal metagenomic reads, and evaluated their performance in terms of assembled contig length, coded protein-coding genes, taxonomic classification as well as other assessments. |
| Sample scope |
Environment |
| Release date |
2020-08-01 |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| Institute of Materia Medica, Chinese Academy of Medical Sciences & Peking Union Medical College
|
|
N/A
|
Chinese Academy of Medical Sciences Innovation Fund for Medical Sciences
|
|
|
| Submitter |
Qianhui
Zhu (zqh_1015@163.com)
|
| Organization |
Institute of Microbiology, Chinese Academy of Sciences |
| Submission date |
2019-08-08 |
