Accession PRJCA001538
Title The sampling dependency of richness estimation in 1 m2 of top-soil
Relevance Environmental
Data Types Raw sequence reads
Organisms soil metagenome
Description In this study, a nested design experiment was conducted in a semiarid temperate steppe in northern China and totally 705 topsoil samples were collected in five sampling quadrats. We focus on a small scale (1.19 m2 for a quadrat) with easy to thoroughly sampling, to illustrate how many prokaryotic species inhabit in 1.19 m2 grassland topsoil (0-20 cm), and to assess the effects of sampling strategies, including sample numbers, biological or technical replicates and their combinations, pooling and sequencing depth on the captured and estimated richness, as well as widespread common species.
Sample scope Environment
Release date 2019-06-26
Grants
Agency program Grant ID Grant title
Chinese Academy of Sciences (CAS) NA
Submitter shuzhen    li  (1902194422@mail.dlut.edu.cn)
Organization Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing
Submission date 2019-06-26

Project Data

Resource name Description
BioSample (175) -
SAMC088260 33 technical replicates of 5HZ
SAMC088434 biological replicates of E4
SAMC088433 biological replicates of E4
SAMC088432 biological replicates of E4
SAMC088431 biological replicates of E4
SAMC088430 biological replicates of E4
SAMC088429 biological replicates of E4
SAMC088428 biological replicates of E4
SAMC088427 biological replicates of E4
SAMC088426 biological replicates of E4
SAMC088425 biological replicates of E4
SAMC088424 biological replicates of E4
SAMC088423 biological replicates of E4
SAMC088422 biological replicates of E4
SAMC088421 biological replicates of E4
SAMC088420 biological replicates of E4
SAMC088419 biological replicates of E4
SAMC088418 biological replicates of E4
SAMC088417 biological replicates of E4
SAMC088416 biological replicates of E4
SAMC088415 biological replicates of E4
SAMC088414 biological replicates of E4
SAMC088413 biological replicates of E4
SAMC088412 biological replicates of E4
SAMC088411 biological replicates of E4
SAMC088410 biological replicates of E2
SAMC088409 biological replicates of E2
SAMC088408 biological replicates of E2
SAMC088407 biological replicates of E2
SAMC088406 biological replicates of E2
SAMC088405 biological replicates of E2
SAMC088404 biological replicates of E2
SAMC088403 biological replicates of E2
SAMC088402 biological replicates of E2
SAMC088401 biological replicates of E2
SAMC088400 biological replicates of E2
SAMC088399 biological replicates of E2
SAMC088398 biological replicates of E2
SAMC088397 biological replicates of E2
SAMC088396 biological replicates of E2
SAMC088395 biological replicates of E2
SAMC088394 biological replicates of E2
SAMC088393 biological replicates of E2
SAMC088392 biological replicates of E2
SAMC088391 biological replicates of E2
SAMC088390 biological replicates of E2
SAMC088389 biological replicates of E2
SAMC088388 biological replicates of E2
SAMC088387 biological replicates of E2
SAMC088386 biological replicates of W4
SAMC088385 biological replicates of W4
SAMC088384 biological replicates of W4
SAMC088383 biological replicates of W4
SAMC088382 biological replicates of W4
SAMC088381 biological replicates of W4
SAMC088380 biological replicates of W4
SAMC088379 biological replicates of W4
SAMC088378 biological replicates of W4
SAMC088377 biological replicates of W4
SAMC088376 biological replicates of W4
SAMC088375 biological replicates of W4
SAMC088374 biological replicates of W4
SAMC088373 biological replicates of W4
SAMC088372 biological replicates of W4
SAMC088371 biological replicates of W4
SAMC088370 biological replicates of W4
SAMC088369 biological replicates of W4
SAMC088368 biological replicates of W4
SAMC088367 biological replicates of W4
SAMC088366 biological replicates of W4
SAMC088365 biological replicates of W4
SAMC088364 biological replicates of W4
SAMC088363 biological replicates of W4
SAMC088362 biological replicates of W2
SAMC088361 biological replicates of W2
SAMC088360 biological replicates of W2
SAMC088359 biological replicates of W2
SAMC088358 biological replicates of W2
SAMC088357 biological replicates of W2
SAMC088356 biological replicates of W2
SAMC088355 biological replicates of W2
SAMC088354 biological replicates of W2
SAMC088353 biological replicates of W2
SAMC088352 biological replicates of W2
SAMC088351 biological replicates of W2
SAMC088350 biological replicates of W2
SAMC088349 biological replicates of W2
SAMC088348 biological replicates of W2
SAMC088347 biological replicates of W2
SAMC088346 biological replicates of W2
SAMC088345 biological replicates of W2
SAMC088344 biological replicates of W2
SAMC088343 biological replicates of W2
SAMC088342 biological replicates of W2
SAMC088341 biological replicates of W2
SAMC088340 biological replicates of W2
SAMC088339 biological replicates of W2
SAMC088338 biological replicates of Z
SAMC088337 biological replicates of Z
SAMC088336 biological replicates of Z
SAMC088335 biological replicates of Z
SAMC088334 biological replicates of Z
SAMC088333 biological replicates of Z
SAMC088332 biological replicates of Z
SAMC088331 biological replicates of Z
SAMC088330 biological replicates of Z
SAMC088329 biological replicates of Z
SAMC088328 biological replicates of Z
SAMC088327 biological replicates of Z
SAMC088326 biological replicates of Z
SAMC088325 biological replicates of Z
SAMC088324 biological replicates of Z
SAMC088323 biological replicates of Z
SAMC088322 biological replicates of Z
SAMC088321 biological replicates of Z
SAMC088320 biological replicates of Z
SAMC088319 biological replicates of Z
SAMC088318 biological replicates of Z
SAMC088317 biological replicates of Z
SAMC088316 biological replicates of Z
SAMC088315 biological replicates of Z
SAMC088314 7 technical replicates of 5NE4_33
SAMC088313 7 technical replicates of 5NE4_32
SAMC088312 7 technical replicates of 5NE4_31
SAMC088311 7 technical replicates of 5NE4_30
SAMC088310 7 technical replicates of 5NE4_1
SAMC088309 7 technical replicates of 5NE2_33
SAMC088308 7 technical replicates of 5NE2_32
SAMC088307 7 technical replicates of 5NE2_31
SAMC088306 7 technical replicates of 5NE2_30
SAMC088305 7 technical replicates of 5NE2_1
SAMC088304 7 technical replicates of 5NW4_33
SAMC088303 7 technical replicates of 5NW4_32
SAMC088302 7 technical replicates of 5NW4_31
SAMC088301 7 technical replicates of 5NW4_30
SAMC088300 7 technical replicates of 5NW4_1
SAMC088299 7 technical replicates of 5NW2_33
SAMC088298 7 technical replicates of 5NW2_32
SAMC088297 7 technical replicates of 5NW2_31
SAMC088296 7 technical replicates of 5NW2_30
SAMC088295 7 technical replicates of 5NW2_1
SAMC088294 7 technical replicates of 5NZ33
SAMC088293 7 technical replicates of 5NZ32
SAMC088292 7 technical replicates of 5NZ31
SAMC088291 7 technical replicates of 5NZ30
SAMC088290 7 technical replicates of 5NZ1
SAMC088289 4 technical replicates of 9NE4_29
SAMC088288 4 technical replicates of 9NE4_28
SAMC088287 4 technical replicates of 9NE4_27
SAMC088286 4 technical replicates of 9NE4_26
SAMC088285 4 technical replicates of 9NE2_29
SAMC088284 4 technical replicates of 9NE2_28
SAMC088283 4 technical replicates of 9NE2_27
SAMC088282 4 technical replicates of 9NE2_26
SAMC088281 4 technical replicates of 9NW4_29
SAMC088280 4 technical replicates of 9NW4_28
SAMC088279 4 technical replicates of 9NW4_27
SAMC088278 4 technical replicates of 9NW4_26
SAMC088277 4 technical replicates of 9NW2_29
SAMC088276 4 technical replicates of 9NW2_28
SAMC088275 4 technical replicates of 9NW2_27
SAMC088274 4 technical replicates of 9NW2_26
SAMC088273 4 technical replicates of 9NZ29
SAMC088272 4 technical replicates of 9NZ28
SAMC088271 4 technical replicates of 9NZ27
SAMC088270 4 technical replicates of 9NZ26
SAMC088269 33 technical replicates of 9HE4
SAMC088268 33 technical replicates of 9HE2
SAMC088267 33 technical replicates of 9HW4
SAMC088266 33 technical replicates of 9HW2
SAMC088265 33 technical replicates of 9HZ
SAMC088264 33 technical replicates of 5HE4
SAMC088263 33 technical replicates of 5HE2
SAMC088262 33 technical replicates of 5HW4
SAMC088261 33 technical replicates of 5HW2
GSA (1) -
CRA001897 The sampling dependency of richness estimation in 1 m2 of top-soil
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