Accession PRJCA001493
Title Specific T isoforms knockdown in chordoma cell line, UCH1
Relevance Medical
Data types Transcriptome or Gene expression
Raw sequence reads
Organisms Homo sapiens
Description In a chordoma cell line, UCH1, we performed siRNA interference assay to achieve specific knockdown of T isoforms. Three groups were created: negative control( NC siRNA treated), T-long isoform knockdown, T-short isoform knockdown. Each group had three biological repeats. Then, 9 samples were conducted whole transcriptome sequencing.
Sample scope Monoisolate
Release date 2020-07-01
PubMed ID Article title Journal name DOI Year
32099384 Identification of the Different Roles and Potential Mechanisms of T Isoforms in the Tumor Recurrence and Cell Cycle of Chordomas OncoTargets and Therapy 10.2147/OTT.S232526 2019
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) General Program 81472370 The analysis of chordoma epigenetic and transcriptional regulatory network with T gene as its core
Submitter Junpeng    Ma  (
Organization Beijing Tiantan Hospital, Capital Medical University
Submission date 2019-06-09

Project Data

Resource name Description
BioSample (9)  show -
GSA (1) -
CRA001667 UCH1_T isoforms_whole transcriptome