Accession |
PRJCA001472 |
Title |
Tree shrew long-read genome assembly |
Relevance |
Model organism |
Data types |
Whole genome sequencing
|
Organisms |
Tupaia chinensis
|
Description |
We applied the long-read single-molecule sequencing and high-through chromosome conformation capture (Hi-C) technology to obtain high-quality chromosome-scale scaffolding of the Chinese tree shrew genome. The new reference genome (TS_2.0) solved the problems in the available tree shrew genomes and enables us to get accurate identification of the large and complex repeat regions, gene structures and specie-specific genomic structural variants. |
Sample scope |
Monoisolate |
Release date |
2019-06-03 |
Publication |
|
Grants |
Agency |
program |
Grant ID |
Grant title |
Chinese Academy of Sciences (CAS)
|
|
U1402224
|
National Natural Science Foundation of China
|
|
Submitter |
Yu
Fan (fanyu@mail.kiz.ac.cn)
|
Organization |
Kunming Institute of Zoology, Chinese Academy of Sciences |
Submission date |
2019-05-30 |