Accession PRJCA001440
Title Population Genomics Analysis Revealed Origin and High-altitude Adaptation of Tibetan Pigs
Relevance Evolution
Data Types Whole genome sequencing
Organisms Sus scrofa
Description To reveal origin and high-altitude adaptation of Tibetan pigs, we collected 48 pigs (including wild and domestic pigs) from China for whole genome resequencing. Among this, 11 Tibetan pigs were sampled from the Qinghai-Tibet Plateau (average altitude > 3,000 m), and nine wild boars were collected from geographically isolated locations in China. The remaining 28 domestic pigs (average of altitude < 600 m) comprises of 11 different pig breeds from China.
Sample scope Multiisolate
Release date 2019-09-16
Grants
Agency program Grant ID Grant title
Chinese Academy of Sciences (CAS) Strategic Priority Research Program of Chinese Academy of Sciences (CAS) XDA2004010301
National Natural Science Foundation of China (NSFC) General Program 31472000
Submitter YunFei    Ma  (mayf@mail.kiz.ac.cn)
Organization Kunming Institute of Zoology, Chinese Academy of Sciences
Submission date 2019-05-21

Project Data

Resource name Description
BioSample (48) -
SAMC070524 PT-10732
SAMC070523 HP-180
SAMC070522 LT-24301
SAMC070521 LBW-24353
SAMC070520 JX-11247
SAMC070519 JH-11729
SAMC070518 WZ-10824
SAMC070517 WP-11258
SAMC070516 LW-622
SAMC070515 LW-77
SAMC070514 LW-76
SAMC070513 LW-75
SAMC070512 LW-74
SAMC070511 LW-4
SAMC070510 LW-22
SAMC070509 LW-21
SAMC070508 LW-20
SAMC070507 LW-1
SAMC070506 RC-721
SAMC070505 XP-624
SAMC070504 XP-67
SAMC070503 XP-66
SAMC070502 XP-65
SAMC070501 XP-3
SAMC070500 XP-2
SAMC070499 XP-16
SAMC070498 XP-15
SAMC070497 XP-14
SAMC070496 TP-606
SAMC070495 TP-605
SAMC070494 TP-604
SAMC070493 TP-603
SAMC070492 TP-602
SAMC070491 TP-601
SAMC070490 TP-167
SAMC070489 TP-108
SAMC070488 TP-105
SAMC070487 TP-104
SAMC070486 TP-168
SAMC070485 WB-513
SAMC070484 WB-512
SAMC070483 WB-511
SAMC070482 WB-510
SAMC070481 WB-509
SAMC070480 WB-508
SAMC070479 WB-503
SAMC070478 WB-502
SAMC070477 WB-520
GSA (1) -
CRA001606 Population Genomics Analysis Revealed Origin and High-altitude Adaptation of Tibetan Pigs
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