Accession PRJCA001334
Title Whole genome resequencing of poplars
Relevance Evolution
Data Types Whole genome sequencing
Organisms Populus mexicana
Populus heterophylla
Populus adenopoda
Populus alba
Populus tremula x Populus alba
Populus davidiana
Populus qiongdaoensis
Populus rotundifolia
Populus tremula
Populus lasiocarpa
Populus wilsonii
Populus deltoides
Populus nigra
Populus fremontii
Populus ilicifolia
Populus laurifolia
Populus angustifolia
Populus koreana
Populus simonii
Populus szechuanica
Populus trinervis
Populus yunnanensis
Description We constructed phylogenetic trees of 29 Populus taxa using 80 individuals based on these re-sequenced genomes. We aimed to examine the prevalence of interspecific gene flow and shared ancestral polymorphisms during the diversification of Populus, a model tree genus, in the Northern Hemisphere.
Sample scope Multispecies
Release date 2019-05-21
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 31561123001
Submitter Mingcheng    Wang  (wangmcyao@163.com)
Organization Sichuan University
Submission date 2019-03-20

Project Data

Resource name Description
BioSample (63) -
SAMC065382 Resequencing of pyun03
SAMC065381 Resequencing of pyun02
SAMC065380 Resequencing of pyun01
SAMC065379 Resequencing of ptriner03
SAMC065378 Resequencing of ptriner02
SAMC065377 Resequencing of ptriner01
SAMC065376 Resequencing of pszc03
SAMC065375 Resequencing of pszc02
SAMC065374 Resequencing of pszc01
SAMC065373 Resequencing of psimon03
SAMC065372 Resequencing of psimon02
SAMC065371 Resequencing of psimon01
SAMC065370 Resequencing of pkorea03
SAMC065369 Resequencing of pkorea02
SAMC065368 Resequencing of pkorea01
SAMC065367 Resequencing of pang01
SAMC065366 Resequencing of plau01
SAMC065365 Resequencing of pil03
SAMC065364 Resequencing of pil02
SAMC065363 Resequencing of pil01
SAMC065362 Resequencing of pfre01
SAMC065361 Resequencing of pnig03
SAMC065360 Resequencing of pnig02
SAMC065359 Resequencing of pnig01
SAMC065358 Resequencing of pdel01
SAMC065357 Resequencing of pwilson03
SAMC065356 Resequencing of pwilson02
SAMC065355 Resequencing of pwilson01
SAMC065354 Resequencing of plas03
SAMC065353 Resequencing of plas02
SAMC065352 Resequencing of plas01
SAMC065351 Resequencing of pwulian03
SAMC065350 Resequencing of pwulian02
SAMC065349 Resequencing of pwulian01
SAMC065348 Resequencing of pning03
SAMC065347 Resequencing of pning02
SAMC065346 Resequencing of pning01
SAMC065345 Resequencing of pte03
SAMC065344 Resequencing of pte02
SAMC065343 Resequencing of pte01
SAMC065342 Resequencing of pro03
SAMC065341 Resequencing of pro02
SAMC065340 Resequencing of pro01
SAMC065339 Resequencing of pqi03
SAMC065338 Resequencing of pqi02
SAMC065337 Resequencing of pqi01
SAMC065336 Resequencing of pda03
SAMC065335 Resequencing of pda02
SAMC065334 Resequencing of pda01
SAMC065333 Resequencing of pca03
SAMC065332 Resequencing of pca02
SAMC065331 Resequencing of pca01
SAMC065330 Resequencing of pal03
SAMC065329 Resequencing of pal02
SAMC065328 Resequencing of pal01
SAMC065327 Resequencing of pad03
SAMC065326 Resequencing of pad02
SAMC065325 Resequencing of pad01
SAMC065324 Resequencing of ph02
SAMC065323 Resequencing of ph01
SAMC065322 Resequencing of pmex03
SAMC065321 Resequencing of pmex02
SAMC065320 Resequencing of pmex01
GSA (1) -
CRA001510 Whole genome resequencing of poplars
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