Accession PRJCA001296
Title A specialized metabolic network selectively modulates Arabidopsis root microbiota
Relevance Model organism
Data Types Metagenome
Organisms Microbiota
Description Plant specialized metabolites have ecological functions, yet the presence of numerous uncharacterized biosynthetic genes in plant genomes suggests that many molecules remain unknown. Here, we discover a triterpene biosynthetic network in the roots of the small mustard plant Arabidopsis thaliana. Collectively, we have elucidated and reconstituted three divergent pathways for the biosynthesis of root triterpenes, namely thalianin, thalianyl medium-chain fatty acid esters and arabidin. A. thaliana mutants disrupted in the biosynthesis of these compounds have altered root microbiota. In vitro bioassays with purified compounds reveal selective growth modulation activities of pathway metabolites towards root microbiota members and their biochemical transformation and utilization by bacteria, supporting a role for this biosynthetic network in shaping an Arabidopsis-specific root microbial community.
Sample scope Multispecies
Release date 2019-02-28
Publication
PubMed ID Article title Journal name DOI Year
A specialized metabolic network selectively modulates Arabidopsis root microbiota Science 10.1126/science.aau6389 2019
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) International (Regional) Cooperation and Exchange Program 31761143017
Submitter Yong-Xin    Liu  (woodcorpse@163.com)
Organization Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
Submission date 2019-02-26

Project Data

Resource name Description
BioSample (140) -
SAMC063615 16S amplicon sequencing of plant root microbiome samplesoilD35L1r3
SAMC063614 16S amplicon sequencing of plant root microbiome samplesoilD35L1r2
SAMC063613 16S amplicon sequencing of plant root microbiome samplesoilD35L1r1
SAMC063612 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r9
SAMC063611 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r8
SAMC063610 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r7
SAMC063609 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r6
SAMC063608 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r5
SAMC063607 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r4
SAMC063606 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r3
SAMC063605 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r2
SAMC063604 16S amplicon sequencing of plant root microbiome sampleJ411D35L1r1
SAMC063603 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r8
SAMC063602 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r7
SAMC063601 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r6
SAMC063600 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r5
SAMC063599 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r4
SAMC063598 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r3
SAMC063597 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r2
SAMC063596 16S amplicon sequencing of plant root microbiome sampleXY54D35L1r1
SAMC063595 16S amplicon sequencing of plant root microbiome samplesoilCp42r3
SAMC063594 16S amplicon sequencing of plant root microbiome samplesoilCp42r2
SAMC063593 16S amplicon sequencing of plant root microbiome samplesoilCp42r1
SAMC063592 16S amplicon sequencing of plant root microbiome sampleIR24Cp35r3
SAMC063591 16S amplicon sequencing of plant root microbiome sampleIR24Cp35r2
SAMC063590 16S amplicon sequencing of plant root microbiome sampleIR24Cp35r1
SAMC063589 16S amplicon sequencing of plant root microbiome sampleA50Cp35r6
SAMC063588 16S amplicon sequencing of plant root microbiome sampleA50Cp35r5
SAMC063587 16S amplicon sequencing of plant root microbiome sampleA50Cp35r4
SAMC063586 16S amplicon sequencing of plant root microbiome sampleA50Cp35r3
SAMC063585 16S amplicon sequencing of plant root microbiome sampleA50Cp35r2
SAMC063584 16S amplicon sequencing of plant root microbiome sampleA50Cp35r1
SAMC063583 16S amplicon sequencing of plant root microbiome sampleBS9r3
SAMC063582 16S amplicon sequencing of plant root microbiome sampleBS9r2
SAMC063581 16S amplicon sequencing of plant root microbiome sampleBS9r1
SAMC063580 16S amplicon sequencing of plant root microbiome sampleBS8r3
SAMC063579 16S amplicon sequencing of plant root microbiome sampleBS8r2
SAMC063578 16S amplicon sequencing of plant root microbiome sampleBS8r1
SAMC063577 16S amplicon sequencing of plant root microbiome sampleBS7r3
SAMC063576 16S amplicon sequencing of plant root microbiome sampleBS7r2
SAMC063575 16S amplicon sequencing of plant root microbiome sampleBS7r1
SAMC063574 16S amplicon sequencing of plant root microbiome sampleBS6r3
SAMC063573 16S amplicon sequencing of plant root microbiome sampleBS6r2
SAMC063572 16S amplicon sequencing of plant root microbiome sampleBS6r1
SAMC063571 16S amplicon sequencing of plant root microbiome sampleBS5r3
SAMC063570 16S amplicon sequencing of plant root microbiome sampleBS5r2
SAMC063569 16S amplicon sequencing of plant root microbiome sampleBS5r1
SAMC063568 16S amplicon sequencing of plant root microbiome sampleBS4r3
SAMC063567 16S amplicon sequencing of plant root microbiome sampleBS4r2
SAMC063566 16S amplicon sequencing of plant root microbiome sampleBS4r1
SAMC063565 16S amplicon sequencing of plant root microbiome sampleBS3r3
SAMC063564 16S amplicon sequencing of plant root microbiome sampleBS3r2
SAMC063563 16S amplicon sequencing of plant root microbiome sampleBS3r1
SAMC063562 16S amplicon sequencing of plant root microbiome sampleBS2r3
SAMC063561 16S amplicon sequencing of plant root microbiome sampleBS2r2
SAMC063560 16S amplicon sequencing of plant root microbiome sampleBS2r1
SAMC063559 16S amplicon sequencing of plant root microbiome sampleBS1r3
SAMC063558 16S amplicon sequencing of plant root microbiome sampleBS1r2
SAMC063557 16S amplicon sequencing of plant root microbiome sampleBS1r1
SAMC063556 16S amplicon sequencing of plant root microbiome sampleColr17
SAMC063555 16S amplicon sequencing of plant root microbiome sampleColr16
SAMC063554 16S amplicon sequencing of plant root microbiome sampleColr15
SAMC063553 16S amplicon sequencing of plant root microbiome sampleColr14
SAMC063552 16S amplicon sequencing of plant root microbiome sampleColr13
SAMC063551 16S amplicon sequencing of plant root microbiome sampleColr11
SAMC063550 16S amplicon sequencing of plant root microbiome sampleColr10
SAMC063549 16S amplicon sequencing of plant root microbiome sampleColr9
SAMC063548 16S amplicon sequencing of plant root microbiome sampleColr5
SAMC063547 16S amplicon sequencing of plant root microbiome sampleColr4
SAMC063546 16S amplicon sequencing of plant root microbiome sampleColr3
SAMC063545 16S amplicon sequencing of plant root microbiome sampleColr2
SAMC063544 16S amplicon sequencing of plant root microbiome sampleThadKOr17
SAMC063543 16S amplicon sequencing of plant root microbiome sampleThadKOr15
SAMC063542 16S amplicon sequencing of plant root microbiome sampleThadKOr14
SAMC063541 16S amplicon sequencing of plant root microbiome sampleThadKOr13
SAMC063540 16S amplicon sequencing of plant root microbiome sampleThadKOr11
SAMC063539 16S amplicon sequencing of plant root microbiome sampleThadKOr10
SAMC063538 16S amplicon sequencing of plant root microbiome sampleThadKOr9
SAMC063537 16S amplicon sequencing of plant root microbiome sampleThadKOr8
SAMC063536 16S amplicon sequencing of plant root microbiome sampleThadKOr7
SAMC063535 16S amplicon sequencing of plant root microbiome sampleThadKOr5
SAMC063534 16S amplicon sequencing of plant root microbiome sampleThadKOr4
SAMC063533 16S amplicon sequencing of plant root microbiome sampleThadKOr3
SAMC063532 16S amplicon sequencing of plant root microbiome sampleThadKOr1
SAMC063531 16S amplicon sequencing of plant root microbiome sampleThahKOr17
SAMC063530 16S amplicon sequencing of plant root microbiome sampleThahKOr16
SAMC063529 16S amplicon sequencing of plant root microbiome sampleThahKOr15
SAMC063528 16S amplicon sequencing of plant root microbiome sampleThahKOr13
SAMC063527 16S amplicon sequencing of plant root microbiome sampleThahKOr11
SAMC063526 16S amplicon sequencing of plant root microbiome sampleThahKOr10
SAMC063525 16S amplicon sequencing of plant root microbiome sampleThahKOr9
SAMC063524 16S amplicon sequencing of plant root microbiome sampleThahKOr8
SAMC063523 16S amplicon sequencing of plant root microbiome sampleThahKOr7
SAMC063522 16S amplicon sequencing of plant root microbiome sampleThahKOr5
SAMC063521 16S amplicon sequencing of plant root microbiome sampleThahKOr4
SAMC063520 16S amplicon sequencing of plant root microbiome sampleThahKOr3
SAMC063519 16S amplicon sequencing of plant root microbiome sampleThahKOr2
SAMC063518 16S amplicon sequencing of plant root microbiome sampleThahKOr1
SAMC063517 16S amplicon sequencing of plant root microbiome sampleACT2CRr17
SAMC063516 16S amplicon sequencing of plant root microbiome sampleACT2CRr16
SAMC063515 16S amplicon sequencing of plant root microbiome sampleACT2CRr15
SAMC063514 16S amplicon sequencing of plant root microbiome sampleACT2CRr14
SAMC063513 16S amplicon sequencing of plant root microbiome sampleACT2CRr13
SAMC063512 16S amplicon sequencing of plant root microbiome sampleACT2CRr11
SAMC063511 16S amplicon sequencing of plant root microbiome sampleACT2CRr10
SAMC063510 16S amplicon sequencing of plant root microbiome sampleACT2CRr9
SAMC063509 16S amplicon sequencing of plant root microbiome sampleACT2CRr8
SAMC063508 16S amplicon sequencing of plant root microbiome sampleACT2CRr5
SAMC063507 16S amplicon sequencing of plant root microbiome sampleACT2CRr3
SAMC063506 16S amplicon sequencing of plant root microbiome sampleACT2CRr2
SAMC063505 16S amplicon sequencing of plant root microbiome sampleACT2KOr17
SAMC063504 16S amplicon sequencing of plant root microbiome sampleACT2KOr16
SAMC063503 16S amplicon sequencing of plant root microbiome sampleACT2KOr15
SAMC063502 16S amplicon sequencing of plant root microbiome sampleACT2KOr14
SAMC063501 16S amplicon sequencing of plant root microbiome sampleACT2KOr13
SAMC063500 16S amplicon sequencing of plant root microbiome sampleACT2KOr10
SAMC063499 16S amplicon sequencing of plant root microbiome sampleACT2KOr9
SAMC063498 16S amplicon sequencing of plant root microbiome sampleACT2KOr8
SAMC063497 16S amplicon sequencing of plant root microbiome sampleACT2KOr7
SAMC063496 16S amplicon sequencing of plant root microbiome sampleThasKO1r17
SAMC063495 16S amplicon sequencing of plant root microbiome sampleThasKO1r16
SAMC063494 16S amplicon sequencing of plant root microbiome sampleThasKO1r15
SAMC063493 16S amplicon sequencing of plant root microbiome sampleThasKO1r14
SAMC063492 16S amplicon sequencing of plant root microbiome sampleThasKO1r13
SAMC063491 16S amplicon sequencing of plant root microbiome sampleThasKO1r10
SAMC063490 16S amplicon sequencing of plant root microbiome sampleThasKO1r9
SAMC063489 16S amplicon sequencing of plant root microbiome sampleThasKO1r8
SAMC063488 16S amplicon sequencing of plant root microbiome sampleThasKO1r7
SAMC063487 16S amplicon sequencing of plant root microbiome sampleThasKO1r3
SAMC063486 16S amplicon sequencing of plant root microbiome sampleThasKO1r2
SAMC063485 16S amplicon sequencing of plant root microbiome sampleThasKO1r1
SAMC063484 16S amplicon sequencing of plant root microbiome sampleThasKO2r16
SAMC063483 16S amplicon sequencing of plant root microbiome sampleThasKO2r11
SAMC063482 16S amplicon sequencing of plant root microbiome sampleThasKO2r10
SAMC063481 16S amplicon sequencing of plant root microbiome sampleThasKO2r9
SAMC063480 16S amplicon sequencing of plant root microbiome sampleThasKO2r5
SAMC063479 16S amplicon sequencing of plant root microbiome sampleThasKO2r4
SAMC063478 16S amplicon sequencing of plant root microbiome sampleThasKO2r3
SAMC063477 16S amplicon sequencing of plant root microbiome sample ThasKO2r2
SAMC063476 16S amplicon sequencing of plant root microbiome sample ThasKO2r1
GSA (1) -
CRA001464 Arabidopsis triterpenes 16S amplicon
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