Accession PRJCA001282
Title Genome of Fusarium oxysporum
Relevance Agricultural
Data Types Genome sequencing and assembly
Organisms Fusarium oxysporum f. cubense
Description Fusarium wilt or Panama disease of banana is caused by the soil-borne fungal pathogen Fusarium oxysporum f. sp. cubense (Foc) and is one of the most catastrophic plant diseases in the world. Foc race 1 (Foc1) nearly destroyed global banana export Trade in the 19th century before the development of the Foc1-resistant cultivar Cavendish. Foc tropical race 4 (FocTR4) is a new serious threat to banana cultivation due to its strong pathogenicity affecting nearly all banana cultivars including the Cavendish subgroup. Foc1 and FocTR4 strains using single-molecule real-time sequencing technology. The Foc1 and FocTR4 assemblies had 35 and 29 contigs with contig N50 lengths of 2.08 Mb and 4.28 Mb, respectively, and the contigs were further anchored and oriented onto 11 chromosomes.
Sample scope Monoisolate
Release date 2019-04-25
Publication
PubMed ID Article title Journal name DOI Year
31063048 Genome data of Fusarium oxysporum f. sp. cubense race 1 and tropical race 4 isolates using long-read sequencing Molecular Plant-Microbe Interactions 10.1094/MPMI-03-19-0063-A 2019
Biomaterial provider liangsheng zhang
Grants
Agency program Grant ID Grant title
No funding support
Submitter Liangsheng    Zhang  (fafuzhang@163.com)
Organization Fujian Agriculture and Forestry University
Submission date 2019-02-19

Project Data

Resource name Description
BioSample (2) -
SAMC063841 Foc1 60
SAMC064005 FocTR4 58
GSA (1) -
CRA001480 Fusarium oxysporum
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