Accession PRJCA000929
Title Single-base methylome profiling of the giant kelp Saccharina japonica
Relevance Agricultural
Data types Epigenomics
Organisms Saccharina japonica
Description Kelp are the largest photosynthetic organisms in the ocean with tissue differentiation and complex life cycles. Other multicellular organisms with similar complexity such as plants and animals are well known to posses epigenetic mechanisms such as DNA methylation to control development and morphogenesis. Despite plant-like body plans and the presence of different life-cycle stages, the kelp species Saccharina japonica has only a very low level of DNA methylation, yet we have found strong evidence for differential methylation of regulatory elements and protein-coding genes which seem to contribute to the formation of life-cycle stages, tissue differentiation, growth and halogen metabolism. Thus, DNA methylation seems to play an important role in kelp, which has not been reported before.
Sample scope Monoisolate
Release date 2018-07-25
Grants
Agency program Grant ID Grant title
Yellow Sea Fisheries Research Institute 2017HY_YJ01 Central Public-interest Scientific Institution Basal Research Fund CAFS
Submitter xiao    fan  (jianbing0912@163.com)
Organization Chinese Academy of Fishery Sciences
Submission date 2018-07-12

Project Data

Resource name Description