Accession PRJCA000665
Title Saturated Tiling Capture Sequencing (STC-Seq) of HLA genes
Relevance Medical
Data Types Targeted Locus (Loci)
Raw sequence reads
Organisms Homo sapiens
Description We present a cost-efficient Saturated Tiling Capture Sequencing (STC-Seq) approach to capturing fourteen HLA class I and II genes, as well as develop a new analysis method.
Sample scope Monoisolate
Release date 2017-12-30
PubMed ID Article title Journal name DOI Year
29334893 High-sensitivity HLA typing by Saturated Tiling Capture Sequencing (STC-Seq). BMC Genomics 10.1186/s12864-018-4431-5 2018
Biomaterial provider China Marrow Donor Program (CMDP)
Submitter Ran    Li  (
Organization Zhejiang University
Submission date 2017-12-12

Project Data

Resource name Description
BioSample (31) -
SAMC019049 HLA-2-32
SAMC019048 HLA-2-29
SAMC019047 HLA-2-28
SAMC019046 HLA-2-27
SAMC019045 HLA-2-24
SAMC019044 HLA-2-23
SAMC019043 HLA-2-22
SAMC019042 HLA-2-21
SAMC019041 HLA-2-20
SAMC019040 HLA-2-19
SAMC019039 HLA-2-18
SAMC019038 HLA-2-17
SAMC019037 HLA-2-16
SAMC019036 HLA-2-15
SAMC019035 HLA-2-14
SAMC019034 HLA-2-13
SAMC019033 HLA-2-11
SAMC019032 HLA-2-10
SAMC019031 HLA-2-9
SAMC019030 HLA-2-8
SAMC019029 HLA-2-7
SAMC019028 HLA-2-6
SAMC019027 HLA-2-5
SAMC019026 HLA-2-4
SAMC019025 HLA-2-3
SAMC019024 HLA-2-1
SAMC019023 HLA-1-5
SAMC019022 HLA-1-4
SAMC019021 HLA-1-3
SAMC019020 HLA-1-2
SAMC019019 HLA-1-1
GSA (1) -
CRA000645 HLA genes capture sequencing data