Identifier PRJCA000538
Title Whole genome re-sequencing data of Arabidopsis thaliana mutants induced by carbon-ion beam
Project data type Whole genome sequencing
Organism Arabidopsis thaliana
Description Heavy-ion beam irradiation is one of the principal methods used to improve plant varieties. Research on mutagenic effects and molecular mechanisms of radiation is an important subject that is multi-disciplinary. However, it is impossible to fully characterize mutations induced by heavy-ion beam irradiation by results mainly focused on the phenotype, chromosome aberration, genetic polymorphism, or sequencing analysis of specific genes only. Here, we re-sequenced 11 mutagenesis progeny (M3) Arabidopsis lines derived from carbon-ion beam irradiation, and focused on substitutions and small insertion-deletion (INDELs). This revealed the molecular mutation spectrum and rate of carbon-ion beam irradiation on Arabidopsis at the genome wide level. This work can also inform theory and advances in radiation mutation breeding.
Sample scope Multiisolate
Release date 2017-10-27
Submitter Yan  Du  (duyan@impcas.ac.cn)
Affiliation Institute of Modern Physics, Chinese Academy of Sciences
Submission date 2017-09-04

Project Data

Resource name Description
BioSample (12) -
SAMC016540 Lab-Col
SAMC016539 C1322
SAMC016538 C1001
SAMC016537 C941
SAMC016536 C828
SAMC016535 C600
SAMC016534 C541
SAMC016533 C357
SAMC016532 C352
SAMC016531 C197
SAMC016530 C116
SAMC016529 C7
GSA (1) -
CRA000464 CRA000464