Accession PRJCA000484
Title The Establishment of Chromatin Accessibility Landscape during Human Early Embryogenesis
Data type Whole genome sequencing
Epigenomics
Raw sequence reads
Organism Homo sapiens
Mus musculus
Description chromatin accessibility landscape by characterizing DNase I hypersensitive sites (DHSs) in human embryos
Sample scope Multiisolate
Release date 2018-03-09
Publication
PubMed ID Article title Journal name DOI Year
29526463 Chromatin Accessibility Landscape in Human Early Embryos and Its Association with Evolution. Cell 10.1016/j.cell.2018.02.028 2018
Submitter Lei    Gao  (gaol@big.ac.cn)
Organization Beijing Institute of Genomics (BIG)
Submission date 2017-07-05

Project Data

Resource name Description
BioSample (30) -
SAMC017364 human 8-cell embryo siSOX2#2 for RNA-seq
SAMC017363 human 8-cell embryo siSOX2#1 for RNA-seq
SAMC017362 human 8-cell siOCT4#2 for RNA-seq
SAMC017361 human 8-cell siOCT4#1 for RNA-seq
SAMC017360 human 8-cell siCTR for RNA-seq rep2
SAMC017359 human 8-cell siCTR for RNA-seq rep1
SAMC017358 mouse 4-cell siOCT4#2 for RNA-seq
SAMC017357 mouse 4-cell siOCT4#1 for RNA-seq
SAMC017356 mouse 4-cell siCTR for RNA-seq rep2
SAMC017355 mouse 4-cell siCTR for RNA-seq rep1
SAMC017354 Mouse blastocyst for DNase-seq rep2
SAMC017353 Mouse blastocyst for DNase-seq rep1
SAMC017352 Mouse morula for DNase-seq rep2
SAMC017351 Mouse morula for DNase-seq rep1
SAMC017350 Mouse 8-cell embryo for DNase-seq rep2
SAMC017349 Mouse 8-cell embryo for DNase-seq rep1
SAMC017348 Mouse 4-cell embryo for DNase-seq rep2
SAMC017347 Mouse 4-cell embryo for DNase-seq rep1
SAMC017346 Mouse 2-cell embryo for DNase-seq rep2
SAMC017345 Mouse 2-cell embryo for DNase-seq rep1
SAMC013227 DNase-seq blastocyst rep2
SAMC013226 DNase-seq blastocyst rep1
SAMC013225 DNase-seq morula rep2
SAMC013224 DNase-seq morula rep1
SAMC013223 DNase-seq 8-cell rep2
SAMC013222 DNase-seq 8-cell rep1
SAMC013221 DNase-seq 4-cell rep2
SAMC013220 DNase-seq 4-cell rep1
SAMC013219 DNase-seq 2-cell rep2
SAMC013218 DNase-seq 2-cell rep1
GSA (1) -
CRA000297 Human early embryo DNase-seq
-