Accession PRJCA000415
Title Comprehensive simulation of metagenomic sequencing data with non-uniform sampling distribution
Relevance Model organism
Data types Metagenome
Organisms synthetic metagenome
Description We developed a non-uniform Metagenomic sequencing Simulation system (nuMetaSim) that is capable of mimicking various factors in real metagenomic sequencing to reflect multiple properties of real data with customizable parameter settings. We generated 9 comprehensive metagenomic datasets with different composition complexity from of 203 bacterial genomes and 2 archaeal genomes related with human intestine system. The data can serve as benchmarks for comparing performance of different methods at different situations, and the software package allows users to generate simulation data that can better reflect the specific properties in their scenarios.
Sample scope Multispecies
Release date 2017-04-06
Submitter Shansong    Liu  (liuss14@mails.tsinghua.edu.cn)
Organization Tsinghua University
Submission date 2017-04-06

Project Data

Resource name Description
BioSample (144)  show -
GSA (1) -
CRA000232 CRA_232