Accession PRJCA000396
Title TOMATO MYC2 ChIP-seq
Data Types Targeted Locus (Loci)
Organisms Solanum lycopersicum
Description The hormone jasmonate (JA), which functions in plant immunity, regulates resistance to pathogen infection and insect attack through triggering genome-wide transcriptional reprogramming in plants. We show that the basic helix-loop-helix transcription factor (TF) MYC2 in tomato (Solanum lycopersicum) acts downstream of the JA receptor to orchestrate JA-mediated activation of both the wounding and pathogen responses. Using chromatin immunoprecipitation sequencing (ChIP-seq) coupled with RNA sequencing assays, we identified 665 MYC2-targeted JA-responsive genes.
Sample scope Multispecies
Release date 2017-12-01
Publication
PubMed ID Article title Journal name DOI Year
28733419 MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato. The Plant Cell 10.1105/tpc.16.00953 2017
Submitter minmin    du  (duminmin@nercv.org)
Organization Institute of Genetics and Developmental Biology (IGDB) of the Chinese Academy of Sciences (CAS)
Submission date 2017-03-26

Project Data

Resource name Description
BioSample (1) -
SAMC012453 TOMATO MYC2 ChIP-seq
GSA (1) -
CRA000222 CRA_222
-