Accession PRJCA000395
Title TOMATO MYC2 RNA-seq
Data Types Transcriptome or Gene expression
Organisms Solanum lycopersicum
Description The hormone jasmonate (JA), which functions in plant immunity, regulates resistance to pathogen infection and insect attack through triggering genome-wide transcriptional reprogramming in plants. We show that the basic helix-loop-helix transcription factor (TF) MYC2 in tomato (Solanum lycopersicum) acts downstream of the JA receptor to orchestrate JA-mediated activation of both the wounding and pathogen responses. Using chromatin immunoprecipitation sequencing (ChIP-seq) coupled with RNA sequencing assays, we identified 665 MYC2-targeted JA-responsive genes.
Sample scope Multispecies
Release date 2017-12-01
Publication
PubMed ID Article title Journal name DOI Year
28733419 MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato. The Plant Cell 10.1105/tpc.16.00953 2017
Submitter minmin    du  (duminmin@nercv.org)
Organization Institute of Genetics and Developmental Biology (IGDB) of the Chinese Academy of Sciences (CAS)
Submission date 2017-03-26

Project Data

Resource name Description
BioSample (1) -
SAMC012452 TOMAOT MYC2 RNA-seq
GSA (1) -
CRA000221 CRA_221
-