Accession PRJCA000394
Title TOMATO MYC2 RNA-seq and ChIP-seq
Relevance Agricultural
Data types Whole genome sequencing
Organisms
Description The hormone jasmonate (JA), which functions in plant immunity, regulates resistance to pathogen infection and insect attack through triggering genome-wide transcriptional reprogramming in plants. We show that the basic helix-loop-helix transcription factor (TF) MYC2 in tomato (Solanum lycopersicum) acts downstream of the JA receptor to orchestrate JA-mediated activation of both the wounding and pathogen responses. Using chromatin immunoprecipitation sequencing (ChIP-seq) coupled with RNA sequencing assays, we identified 665 MYC2-targeted JA-responsive genes.
Sample scope Monoisolate
Release date 2018-04-01
Submitter minmin    du  (duminmin@nercv.org)
Organization Institute of Genetics and Developmental Biology (IGDB) of the Chinese Academy of Sciences (CAS)
Submission date 2017-03-26

Project Data

Resource name Description