Accession PRJCA000355
Title Dectect Zika virus (ZIKV) induced genes by Next Generation Sequencing
Relevance Medical
Data types Transcriptome or Gene expression
Organisms Homo sapiens
Description Next-generation sequencing (NGS) is a good tool to analysis of virus induced genes. The purposes of this study are to detect Zika virus induced genes in A549 cells by mRNA transcriptome profiling (RNA-seq).A549 mRNA profiles of mock and Zika virus infected cells (sti, MOI=5) were got by deep sequencing, in duplicate, using Illumina NextSeq500. qRT–PCR validation assay was conducted using SYBR Green assays.
Sample scope Monoisolate
Release date 2017-02-20
Publication
PubMed ID Article title Journal name DOI Year
28314593 25-Hydroxycholesterol Protects Host against Zika Virus Infection and Its Associated Microcephaly in a Mouse Model Immunity 10.1016/j.immuni.2017.02.012 2017
Submitter Chunfeng    li  (chunfengli1985@163.com)
Organization Suzhou Institute of Systems Medicin
Submission date 2017-02-20

Project Data

Resource name Description
BioSample (4) -
SAMC010558 stimulate2
SAMC010557 stimulate1
SAMC010556 mock2
SAMC010555 mock1
GSA (1) -
CRA000190 CRA_190