Accession PRJCA000313
Title Shuhui498 rice genome sequencing and assembly
Relevance Agricultural
Umbrella project

MMDB: Molecular Module-based Designer Breeding Systems

XDA08020000: Analysis of module systems and their coupling effects

XDA08020300: Optimization of multi-module assembly and simulated estimation of its coupling effect

XDA08020302: Database construction and algorithm development

Data types Whole genome sequencing
Organisms Oryza sativa
Description Sequencing and de novo assembly of a near complete indica rice genome
Sample scope Monoisolate
Release date 2017-05-08
Publication
PubMed ID Article title Journal name DOI Year
31767853 Assembly of chromosome-scale contigs by efficiently resolving repetitive sequences with long reads Nature Communications 10.1038/s41467-019-13355-3 2019
28469237 Sequencing and de novo assembly of a near complete indica rice genome Nature Communications 10.1038/ncomms15324 2017
Grants
Agency program Grant ID Grant title
Chinese Academy of Sciences (CAS) Strategic Priority Research Program of Chinese Academy of Sciences (CAS) XDA08000000
Submitter yan    li  (liyan_bioinf@genetics.ac.cn)
Organization Institute of Genetics and Developmental Biology Chinese Academy of Sciences
Submission date 2016-12-08

Project Data

Resource name Description
BioSample (375)  show -
GSA (1) -
CRA000161 CRA_161