| Accession |
PRJCA000262 |
| Title |
Identification of full-length cDNA in Rice by PacBio sequencing |
| Relevance |
Agricultural |
| Data types |
Transcriptome or Gene expression
|
| Organisms |
Oryza sativa
|
| Description |
To exploit the advantage of PacBio sequencing’s long reads as possible in full-length transcripts study, we used Hiseq2000 paired-end reads to correct CCSs with different minimum predicated accuracy (MPA) and validated the full-length splicing isoforms by verifying the chained splicing junctions with at least 2 uniquely mapped Hiseq2000 reads. |
| Sample scope |
Monoisolate |
| Release date |
2018-12-10 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 30288819
|
PacBio full-length cDNA sequencing integrated with RNA-seq reads drastically improves the discovery of splicing transcripts in rice
|
The Plant Journal
|
10.1111/tpj.14120
|
2019
|
|
|
| Submitter |
Zhang
bing (zhangbing@big.ac.cn)
|
| Organization |
Chinese Academy of Sciences |
| Submission date |
2016-08-16 |
