Accession |
PRJCA000203 |
Title |
cancer genome sequencing |
Relevance |
Medical |
Data types |
Targeted Locus (Loci)
|
Organisms |
Homo sapiens
|
Description |
We recruited a female patient who had a chronic Hepatitis B virus infection and who was diagnosed with HCC at the age of 35. The tumour section was determined to be grade II–III HCC with prominent clear cell components. The adjacent non-tumour tissue was dissected as a control.Two micrograms of genomic DNA from the tumour sample was digested for 30min at 37C using 1 ml EcoRI, then 100 bp single end reads were generated using a Hiseq 2000. |
Sample scope |
Multiisolate |
Release date |
2016-03-11 |
Publication |
PubMed ID |
Article title |
Journal name |
DOI |
Year |
23962614
|
Determination of genomic copy number alteration emphasizing a restriction site-based strategy of genome re-sequencing.
|
Bioinformatics (Oxford, England)
|
10.1093/bioinformatics/btt481
|
2013
|
|
Submitter |
Caihong
Zheng (zhengch@big.ac.cn)
|
Organization |
Chinese Academy of Sciences |
Submission date |
2016-03-11 |