Accession PRJCA000181
Title Resequencing and genotyping of rice landrace
Relevance Agricultural
Umbrella project

MMDB: Molecular Module-based Designer Breeding Systems

XDA08020000: Analysis of module systems and their coupling effects

XDA08020100: High-throughput analysis of molecular module systems

XDA08020101: Analysis of molecular module systems for complex traits in rice

Data types Whole genome sequencing
Organisms Oryza sativa
Description Here sequenced and genotyped diverse sample of 950 worldwide rice varieties, including the Oryza sativa indica and Oryza sativa japonica subspecies, to perform GWAS. We identified a total of new loci associated with flowering time and with ten grain-related traits, indicating that the larger sample increased the power to detect trait-associated variants using GWAS. With these data, we analyzed the molecular module systems for complex traits in rice.
Sample scope Multiisolate
Release date 2020-12-31
Submitter Bin    Han  (bhan@ncgr.ac.cn)
Organization Shanghai Institutes for Biological Sciences
Submission date 2016-02-19

Project Data

Resource name Description
BioSample (979)  show -
GSA (1) -
CRA000065 CRA_65