Accession PRJCA000098
Title Comparative analysis of DNA methylation reprogramming during embryogenesis across metazoan
Relevance Evolution
Umbrella project

eGPS: evolutionary Genotype-Phenotype Systems biology

Key theories & Model

The driving effect of DNA methylation on complex traits

Data Types Whole genome sequencing
Epigenomics
Raw sequence reads
Organisms Nematostella vectensis
Apis mellifera
Strongylocentrotus purpuratus
Ciona savignyi
Mus musculus
Daphnia pulex
Description Methylomes(WGBS) of sea anemone gametes and embryos(FL:3hours,7hours,22hours;MA:4hours,7hours), honeybee gametes and embryos(worker:7hours,39hours;drone:7hours,39 hours), sea urchin gametes and embryos(16cell,256cell,1kcell) and ciona gametes and embryos(8cell,110cell),daphnia whole body and mouse placenta.
Sample scope Multiisolate
Release date 2019-05-30
Publication
PubMed ID Article title Journal name DOI Year
Evolutionary transition between invertebrates and vertebrates via methylation reprogramming in embryogenesis National Science Review 10.1093/nsr/nwz064 2019
Grants
Agency program Grant ID Grant title
Chinese Academy of Sciences (CAS) Strategic Priority Research Program of Chinese Academy of Sciences (CAS) XDB13040200
National Natural Science Foundation of China (NSFC) Major Research Plan 91519306
National Natural Science Foundation of China (NSFC) Excellent Young Scientists Fund 31425015
Submitter xiaocui    xu  (xuxc@big.ac.cn)
Organization Beijing Institute of Genomics, Chinese Academy of Sciences
Submission date 2015-11-17

Project Data

Resource name Description
BioSample (43) -
SAMC047998 daphnia methylome
SAMC047997 mouse placenta methylome
SAMC047996 ciona sperm methylome rep3
SAMC047995 ciona sperm methylome rep2
SAMC047994 ciona sperm methylome rep1
SAMC047993 ciona oocyte methylome rep3
SAMC047992 ciona oocyte methylome rep2
SAMC047991 ciona oocyte methylome rep1
SAMC047990 ciona cleavage methylome rep3
SAMC047989 ciona cleavage methylome rep2
SAMC047988 ciona cleavage methylome rep1
SAMC047987 ciona gastrula methylome rep2
SAMC047986 ciona gastrula methylome rep1
SAMC047985 sea urchin sperm methylome rep2
SAMC047984 sea urchin sperm methylome rep1
SAMC047983 sea urchin oocyte methylome rep2
SAMC047982 sea urchin oocyte methylome rep1
SAMC047981 sea urchin cleavage methylome rep2
SAMC047980 sea urchin cleavage methylome rep1
SAMC047979 sea urchin blastula methylome rep2
SAMC047978 sea urchin blastula methylome rep1
SAMC047977 sea urchin gastrula methylome rep2
SAMC047976 sea urchin gastrula methylome rep1
SAMC047975 honey bee oocyte methylome rep2
SAMC047974 honey bee oocyte methylome rep1
SAMC047973 honey bee sperm methylome rep2
SAMC047972 honey bee sperm methylome rep1
SAMC047971 honey bee worker blastoderm methylome rep2
SAMC047970 honey bee worker blastoderm methylome rep1
SAMC047969 honey bee worker gastrula methylome rep2
SAMC047968 honey bee worker gastrula methylome rep1
SAMC047967 honey bee drone blastoderm methylome rep2
SAMC047966 honey bee drone blastoderm methylome rep1
SAMC047965 honey bee drone gastrula methylome rep2
SAMC047964 honey bee drone gastrula methylome rep1
SAMC047963 sea anemone sperm methylome FL
SAMC047962 sea anemone oocyte methylome FL
SAMC047961 sea anemone sperm methylome MA
SAMC047960 sea anemone cleavage methylome FL
SAMC047959 sea anemone cleavage methylome MA
SAMC047958 sea anemone blastula methylome FL
SAMC047957 sea anemone blastula methylome MA
SAMC047956 sea anemone gastrula methylome FL
GSA (1) -
CRA001225 Methylomes of gametes and embryos of sea anemone, honeybee, sea urchin and ciona, daphnia and mouse placenta
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