FSPP functional smORF-encoded peptides predictor

Introduction

FSPP (Functional SmORF-encoded Peptides Predictor) is a tool which tends to predict authentic SEPs and their functions in a high throughput method. FSPP uses the overlap of detected SEPs from Ribo-seq and mass spectrometry as target objects. With the expression data on transcription and translation levels, FSPP builds two co-expression networks. Combing co-location relations, FSPP constructs a compound network and then annotates SEPs with functions of adjacent nodes.

Publications

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Credits

  1. hui li lihui01@ict.ac.cn
    Investigator

    advanced research, Beijing Institute of Genomics, Chinese Academy of Sciences, China

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Summary
AccessionBT007071
Tool TypeToolkit
CategoryGene orthology prediction
PlatformsLinux/Unix
TechnologiesR
User InterfaceTerminal Command Line
Input DataFASTQ
Download Count0
Country/RegionChina
Submitted Byhui li